PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0853.5.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 307aa    MW: 33972.6 Da    PI: 4.7007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0853.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.1e-1792139354
                  AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          ykGVr++k +g+++AeIrd +     + +r++lg+f+taeeAa a+ +   +++
  Kaladp0048s0853.5.p  92 YKGVRRRK-WGKFAAEIRDpF-----QkTRVWLGTFDTAEEAADAYRRKEIEYK 139
                          9****998.**********55.....34******************99888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.81E-1791140IPR016177DNA-binding domain
PROSITE profilePS5103218.26891149IPR001471AP2/ERF domain
SMARTSM003808.8E-1691140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2191137IPR001471AP2/ERF domain
PRINTSPR003674.7E-1092103IPR001471AP2/ERF domain
CDDcd000182.83E-2192131No hitNo description
PfamPF008479.3E-1192137IPR001471AP2/ERF domain
PRINTSPR003674.7E-10114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MRSPRRDMDG FESVQKVRIF CNDPYATESD SSSDEEDHLV GDRTRPGKRY VQEILIRGDG  60
KSERNKQNEI AQRSGGFRLA ESSRKGKSST MYKGVRRRKW GKFAAEIRDP FQKTRVWLGT  120
FDTAEEAADA YRRKEIEYKK LVAEKRSLLV KTCSAFVTPP GPSSSDDTAD FCSLHSPSSV  180
LDVTGAAGRQ DRRSTGPDHR VKEESSFMME EEVLISTFLK EPIFSAELSS VFDDSKLFMC  240
ESDQYLNGSS SGLLSADGVT DSGADADLDL ALDAGFGWAS DEFAWIDETL NIEPSTLLCI  300
NGDSTA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19298KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.11e-23cytokinin response factor 6